For a annotation object this function intersects the loci of it with the output of the tableSpecies function.
The table with locations from
The annotation object.
The level of intersection.
Allowed flanking space for intersection.
Function expects as an input table from
tableSpecies with the option
locations=TRUE. Further, it needs an annotation object,
as provided by the
getAnnotation function. With that it intersects then the loci on the level as specified in
"gene" is supported.
flanking option allows for flanking space up- and down-stream of the genes. This is especially then useful if the novel gene
candidates are in the extension of known genes (e.g. responsible for regulation or if they are novel exons.)
A table with intersection loci.
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