subDose: Rewrite the Dose File from a Beagle Output
In hoardeR: Collect and Retrieve Annotation Data for Various Genomic Data Using Different Webservices
Description
Usage
Arguments
Details
Value
Author(s)
Description
This function takes a Dose Beagle output and rewrites the output.
Usage
1
Arguments
file
Location of the original Beagle file (String).
vmmk
Location of the Variant Map Master key (String).
out
Name and location of the output file (String).
verbose
The function gives feedback.
removeInsertions
All Indels will be removed..
Details
This function takes a Beagle Dose file and rewrites the alleles from numerical to character, based
on the information provided in a variant map master key.
Value
A rewritten beagle phased file.
Author(s)
Daniel Fischer
hoardeR documentation built on May 2, 2019, 5:15 a.m.
R Package Documentation
Browse R Packages
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Details Value Author(s)
Description
This function takes a Dose Beagle output and rewrites the output.
Usage
1 |
Arguments
file |
Location of the original Beagle file ( |
vmmk |
Location of the Variant Map Master key ( |
out |
Name and location of the output file ( |
verbose |
The function gives feedback. |
removeInsertions |
All Indels will be removed.. |
Details
This function takes a Beagle Dose file and rewrites the alleles from numerical to character, based on the information provided in a variant map master key.
Value
A rewritten beagle phased file.
Author(s)
Daniel Fischer
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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