hzar.doCLTData1DRaw: Create a 'hzar.obsData' object using a table of individual...
In hzar: Hybrid Zone Analysis using R

Description Usage Arguments Details Value Author(s) See Also

Create a hzar.obsData object using a table of individual traits.

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hzar.doCLTData1DRaw(distance, traitValue)
hzar.doNormalData1DRaw(site.dist, traitSite, traitValue)
hzar.mapSiteDist(siteID, distance)

`distance`	The distance of the sampling site. For `hzar.doCLTData1DRaw`, samples at the same distance are treated as being from the same sampling site.
`traitValue`	The value of the trait of the individual sampled.
`traitSite`	The id of site where the individual was found.
`site.dist`	A named vector mapping site id codes to the distance of the sampling site. The function `hzar.mapSiteDist` returns a suitable vector.
`siteID`	The list of id codes associated with the sampling site. This list should be identical in length to `distance`, each entry must be unique, and the order of the sites referenced must be identical for `distance` and `siteID`.

For hzar.doCLTData1DRaw:

If for any locality, there is only a small number of samples taken, warnings will be issued.

If at any locality, the sample variance is 0, a warning is issued, and additional variance is included by estimating the amount of variance ignored due to measurement error.

For hzar.doNormalData1DRaw:

Use the helper function hzar.mapSiteDist to generate site.dist.

The hzar.obsData object created is meant for use with the models constructed using hzar.makeCline1DNormal.

A hzar.obsData object, using the site dinstances and sample means and variances as calculated from the values given.

Graham Derryberry asterion@alum.mit.edu

hzar.obsData

hzar documentation built on May 2, 2019, 7 a.m.