hzar.plot.fzCline: Plot the 95% credible cline region for the given locus model.

In hzar: Hybrid Zone Analysis using R

Description

Plots the maximum likelihood cline and observed frequency data over a the associated fuzzy cline region. The default region is the 95% credible cline region.

Usage

hzar.plot.fzCline(dataGroup,
                  fzCline = hzar.getCredParamRed(dataGroup),
                  type = "p", pch = "+",
                  col = "black", fzCol = "gray", ...)

Arguments

dataGroup	The hzar.dataGroup object for which to generate a fuzzy cline. Defaults to a 95% credible interval region.
fzCline	The hzar.fzCline object to plot.
type	The type parameter to pass to hzar.plot.obsData.
pch	The plotting character to pass to hzar.plot.obsData.
col	The color to plot the maximum likelihood cline and the observed frequencies.
fzCol	The color to fill the fuzzy cline region with.
...	Additional parameters to pass to the initial call to plot.

Author(s)

Graham Derryberry [e-mail]

See Also

hzar.getCredParamRed hzar.make.fzCline plot hzar.plot.obsData hzar.plot.cline

Examples

##TODO

Example output

Loading required package: MCMCpack
Loading required package: coda
Loading required package: MASS
##
## Markov Chain Monte Carlo Package (MCMCpack)
## Copyright (C) 2003-2019 Andrew D. Martin, Kevin M. Quinn, and Jong Hee Park
##
## Support provided by the U.S. National Science Foundation
## (Grants SES-0350646 and SES-0350613)
##
Loading required package: foreach

hzar documentation built on May 2, 2019, 7 a.m.