R/iRfcb-package.R

In iRfcb: Tools for Managing Imaging FlowCytobot (IFCB) Data

#' @keywords internal
"_PACKAGE"

## usethis namespace: start
#' @importFrom curl curl_download new_handle curl_fetch_memory handle_setopt multi_download
#' @importFrom dplyr across arrange bind_rows case_when coalesce count cur_column desc everything
#'   filter first full_join group_by if_any left_join mutate n n_distinct
#'   pull relocate rename rename_with rowwise select slice_min summarise summarize
#'   ungroup %>% as_tibble tibble all_of contains row_number
#' @importFrom ggplot2 aes element_blank element_rect geom_line geom_sf geom_text
#'   ggsave ggplot labs scale_color_manual stat_function theme theme_minimal ylim xlim
#'   annotate coord_sf
#' @importFrom png writePNG
#' @importFrom lifecycle deprecate_warn deprecated is_present deprecate_stop
#' @importFrom lubridate ceiling_date date day floor_date month round_date
#'   year ymd_hms as_datetime ymd days hours minutes seconds with_tz
#' @importFrom readr cols col_character read_delim type_convert
#' @importFrom reticulate import py_available py_module_available py_run_string
#'   source_python use_virtualenv virtualenv_create virtualenv_list virtualenv_root
#'   use_python py_discover_config py_require py_list_packages py_install py_config
#'   virtualenv_exists
#' @importFrom R.matlab readMat
#' @importFrom sf st_area st_as_sf st_as_sfc st_bbox st_crs st_geometry_type
#'   st_intersection st_intersects st_make_valid st_read st_transform
#'   st_union st_within st_wrap_dateline st_buffer
#' @importFrom stats aggregate median na.omit setNames
#' @importFrom stringr str_extract str_remove str_remove_all str_replace
#'   str_replace_all word str_match
#' @importFrom tidyr pivot_longer pivot_wider
#' @importFrom tools file_path_sans_ext
#' @importFrom utils flush.console read.csv read.table setTxtProgressBar txtProgressBar
#'   write.table
#' @importFrom worrms wm_records_names
#' @importFrom zip unzip zip zipr
## usethis namespace: end
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