c/e rates for a regular sampling scheme

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Description

regular_sampling_scheme calculates colonization and extinction rates for a community or groups in a community.

Usage

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regular_sampling_scheme(x, vector, level = NULL, otus = NULL, int = NULL)

Arguments

x

A single dataset.

vector

A vector indicating the columns with presence-absence data.

level

The name of the column with groups to calculate their c_e pair.

otus

Minimal number of rows for each group

int

Accuracy to calculate the c_e pairs with.

Value

A dataframe with colonization and extinction rates along with their associated transition probabilities or their lower and upper confidence intervals, for each group if specified.

See Also

irregular_single_dataset, irregular_multiple_datasets

Examples

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regular_sampling_scheme(alonso[[1]],3:6)
regular_sampling_scheme(alonso[[1]],3:6,"Guild",5)
regular_sampling_scheme(alonso[[1]],3:6,"Guild",5, 0.001)