Files in island

Stochastic Island Biogeography Theory Made Easy

configure

MD5

NEWS.md

NAMESPACE

configure.ac

DESCRIPTION

cleanup

R/idaho.R R/IBDModels.R R/da_MacKenzie_mle.R R/lakshadweep.R R/RatesToProbabilities.R R/simberloff.R R/IrregularSamplingTimes.R R/EnvironmentalFit.R R/RegularSamplingTimes.R R/NullModel.R R/da_upgma_AIC_cedp.R R/lakshadweepPLUS.R R/alonso15.R R/island.R R/da_mle_cedp.R R/DataSimulation.R R/EvaluationCriteria.R

src/Makevars.win

src/MODEL_SELECTION_UPGMA_MacKENZIE_R_SHLIB.c

src/IO_AKAIKE_Model_Selection.c

src/Rates_into_Probabilities.c

src/upgma_clustering.h

src/da_IBT_Optimization.h

src/MODEL_Parameter_Space_STRUCT_DEF.h

src/MODEL_SELECTION_UPGMA_R_FUNCTION.c

src/HEADERS.h

src/GSL_MacKenzie_NLLikelihood_Function.c

src/R_SHLIB___mle_MacKenzie_NLLikelihood_Minimization.c

src/Checking_for_Parameter_Correctness.c

src/GSL_Minimization_Simplex.c

src/GSL_MacKenzie_NLL_Uneven_Function.c

src/init.c

src/R_SHLIB___mle_MacKenzie_NLL_Uneven_Minimization.c

src/MODEL.h

src/Parameter_Model.c

src/GSL_NLLikelihood_Function.c

src/MODEL_Parameter_Fitting_STRUCT_DEF.h

src/Parameter_Space_R_SHLIB.c

src/include.Parameter_Model.global.h

src/MODEL_SELECTION_UPGMA_MacKENZIE_R_FUNCTION.c

src/Time_Control.c

src/MODEL_SELECTION_UPGMA_R_SHLIB.c

src/MacKenzie_NLLikelihood_Function.c

src/Transition_Matrix.c

src/mle_MacKenzie_Uneven_Matrix_R_SHLIB.c

src/include.Parameter_Space.global.h

src/EUCLIDIAN_DISTANCE_MATRIX.c

src/Probability_Rates.c

src/include.Time_Control.global.h

src/Create_Binary_Combination.c

src/IO_Missing_Values.c

src/MODEL_Time_Control_STRUCT_DEF.h

src/GSL_NLL_Function_Uneven.c

src/config.h

src/UPGMA_CLUSTERING_PARTITION.c

src/Counting_Replicates_per_Time.c

src/Makevars.in

src/upgma_clustering.c

src/R_SHLIB___mle_NLL_Uneven_Minimization.c

src/config.h.in

src/SP_Matrix_Data.c

src/da_IBT_Functions.h

src/MODEL_SP_Matrix_Data_STRUCT_DEF.h

src/MODEL_Parameter_Model_STRUCT_DEF.h

src/Counting_Type_of_Transitions.c

src/mle_Col_Ext_Uneven_Matrix_R_SHLIB.c

src/IO_AKAIKE_Model_Selection.h

src/IO_Missing_Values.h

inst/CITATION

inst/doc/detectability.html

inst/doc/IBDmodels.R inst/doc/island.Rmd

inst/doc/island.html

inst/doc/detectability.Rmd inst/doc/IBDmodels.Rmd inst/doc/island.R

inst/doc/IBDmodels.html

inst/doc/detectability.R

build/vignette.rds

build/partial.rdb

tests/testthat.R

tests/testthat/i2.rds

tests/testthat/test_general.R

tests/testthat/g3.rds

tests/testthat/g1.rds

tests/testthat/test_environmental.R tests/testthat/test_detectability.R

tests/testthat/g4.rds

tests/testthat/test_ibd.R tests/testthat/test_irregular.R tests/testthat/test_regular.R

tests/testthat/i1.rds

tests/testthat/g2.rds

vignettes/island.Rmd vignettes/detectability.Rmd vignettes/IBDmodels.Rmd

data/simberloff.RData

data/alonso15.RData

data/lakshadweep.RData

data/lakshadweepPLUS.RData

data/idaho.RData

man/mss_cedp.Rd man/regular_sampling_scheme.Rd man/upgma_model_selection.Rd man/irregular_multiple_datasets.Rd man/lakshadweepPLUS.Rd man/cetotrans.Rd man/weight_of_evidence.Rd man/irregular_single_dataset.Rd man/alonso15.Rd man/ibd_models.Rd man/simberloff.Rd man/idaho.Rd man/rates_calculator.Rd man/sss_cedp.Rd man/r_squared.Rd man/lakshadweep.Rd man/data_generation.Rd man/akaikeic.Rd man/island.Rd man/all_environmental_fit.Rd

island documentation built on Jan. 23, 2023, 5:30 p.m.