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localScore: Package for Sequence Analysis by Local Score
Functionalities for calculating the local score and calculating statistical relevance (p-value) to find a local Score in a sequence of given distribution (S. Mercier and J.-J. Daudin (2001) <https://hal.science/hal-00714174/>) ; S. Karlin and S. Altschul (1990) <https://pmc.ncbi.nlm.nih.gov/articles/PMC53667/> ; S. Mercier, D. Cellier and F. Charlot (2003) <https://hal.science/hal-00937529v1/> ; A. Lagnoux, S. Mercier and P. Valois (2017) <doi:10.1093/bioinformatics/btw699> ).
Getting started
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Package details |
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| Author | Sebastian Simon [aut], Chris Verschelden [aut], Charly Marty [aut], David Robelin [aut, cre], Sabine Mercier [aut], Sebastien Dejean [aut], The authors of Eigen the library for the included version of Eigen [cph] |
| Maintainer | David Robelin <david.robelin@inrae.fr> |
| License | GPL (>= 2) | file LICENSE |
| Version | 2.0.1 |
| Package repository | View on CRAN |
| Installation |
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