HydroScore: Dictionary
In localScore: Package for Sequence Analysis by Local Score
HydroScore R Documentation
Dictionary
Description
Provides integer scores related to an hydrophobicity level of each amino acid. This score function is inspired by the Kyte and Doolittle (1982) scale.
Usage
data(HydroScore)
Format
A score function for the 20 amino acid
Source
Kyte & Doolittle (1982) J. Mol. Biol. 157, 105-132
Examples
data(HydroScore)
HydroScore
data(Seq219)
Seq219
seqScore <- CharSequence2ScoreSequence(Seq219,HydroScore)
seqScore[1:30]
localScoreC(seqScore)$localScore
localScore documentation built on April 3, 2025, 5:26 p.m.
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| HydroScore | R Documentation |
Dictionary
Description
Provides integer scores related to an hydrophobicity level of each amino acid. This score function is inspired by the Kyte and Doolittle (1982) scale.
Usage
data(HydroScore)
Format
A score function for the 20 amino acid
Source
Kyte & Doolittle (1982) J. Mol. Biol. 157, 105-132
Examples
data(HydroScore)
HydroScore
data(Seq219)
Seq219
seqScore <- CharSequence2ScoreSequence(Seq219,HydroScore)
seqScore[1:30]
localScoreC(seqScore)$localScore
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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