API for megaptera
MEGAPhylogeny Techniques in R
| Global functions | |
|---|---|
| EFetchHigherTaxon | Man page |
| EFetchLocus | Man page |
| MAD | Man page |
| NCBI.wrap | Man page |
| NCBIeaa | Man page |
| addNbAcc | Man page |
| addTip | Man page |
| alignGenus | Man page |
| calcDistToRef | Man page |
| cetacea | Man page |
| check.Clades | Man page |
| check.Coverage | Man page |
| check.Markers | Man page |
| check.NameChanges | Man page |
| check.Species | Man page |
| check.TaxAgainstPhy | Man page |
| compare.phylo.backbone | Man page |
| conn | Man page |
| coverage | Man page |
| dbAutoFillTaxonomy | Man page |
| dbDeleteSpec | Man page |
| dbPars | Man page |
| dbPars-class | Man page |
| dbReadDNA | Man page |
| dbReadDNAbin | Man page |
| dbReadReference | Man page |
| dbReadTaxonomy | Man page |
| dbUpdateLocus | Man page |
| dbUpdateTaxonomy | Man page |
| dbWriteDNA | Man page |
| dbWriteDNAbin | Man page |
| dbWriteString | Man page |
| dbconnect | Man page |
| downloadSequences | Man page |
| esearch | Man page |
| extractLocus | Man page |
| filter.alignment | Man page |
| fixTaxonomy | Man page |
| fleshoutGuidetree | Man page |
| force.mp | Man page |
| funX | Man page |
| getGeneRange | Man page |
| getLineage | Man page |
| getMaxDist | Man page |
| insert.tip.phylo | Man page |
| is.alignable | Man page |
| loci | Man page |
| locus | Man page |
| locus-class | Man page |
| mafft.merge | Man page |
| markersGenbank | Man page |
| maxDist | Man page |
| maxDistMPI | Man page |
| meanPairwiseIdentity | Man page |
| megaptera-package | Man page |
| megapteraHeatmap | Man page |
| megapteraPars | Man page |
| megapteraPars-class | Man page |
| megapteraProj | Man page |
| megapteraProj-class | Man page |
| myDist | Man page |
| ncbiLineage | Man page |
| ncbiTaxonomy | Man page |
| nucleotideOverlap | Man page |
| pars | Man page |
| prune.phylo.rank | Man page |
| read.benchmark.db | Man page |
| revCompTest | Man page |
| select.seqs | Man page |
| setLocus | Man page |
| slog | Man page |
| sortRanks | Man page |
| specCons | Man page |
| speciesConsensus | Man page |
| splitGiTaxon | Man page |
| sql.conform | Man page |
| sql.wrap | Man page |
| sqlTaxonomyHeader | Man page |
| stepA | Man page |
| stepAA | Man page |
| stepB | Man page |
| stepC | Man page |
| stepD | Man page |
| stepE | Man page |
| stepF | Man page |
| stepG | Man page |
| stepH | Man page |
| strip.infraspec | Man page |
| strip.spec | Man page |
| summary.sproj | Man page |
| supermatrix | Man page |
| tab | Man page |
| tax | Man page |
| tax2tree | Man page |
| taxon | Man page |
| taxon-class | Man page |
| term | Man page |
| unalignable | Man page |
| whereToInsert | Man page |
| write.dna.spectable | Man page |
