quickPlot1: Generic plotting showing results of microPop

In microPop: Process-Based Modelling of Microbial Populations

Description

Generic plotting showing results of microPop

Usage

quickPlot1(
  soln,
  numR,
  numStrains,
  microbeNames,
  yLabel,
  xLabel,
  sumOverStrains,
  resourceLegendPosition = "topleft",
  microbeLegendPosition = "topleft",
  saveFig = FALSE,
  figType = "eps",
  figName = "microPopFig"
)

Arguments

soln	ODE output from microPopModel() i.e. matrix out$solution
numR	Scalar. Number of resources
numStrains	Scalar. Number of strains per group
microbeNames	Vector of strings which contains the names of the microbial groups in the system e.g. c('Bacteroides','Acetogens')
yLabel	String for y axis label
xLabel	String for x axis label
sumOverStrains	Logical
resourceLegendPosition	String. Position of legend in resource plot, default is 'topleft'
microbeLegendPosition	String. Position of legend in microbe plot, default is 'topleft'
saveFig	Logical. Default is FALSE
figType	String. Default is "eps"
figName	String. Default is "microPopFig"

Value

Nothing just generates a plot

microPop documentation built on Feb. 3, 2022, 5:07 p.m.