gintervals.is.bigset: Tests for big intervals set

In misha: Toolkit for Analysis of Genomic Data

Tests for big intervals set

Description

Tests for big intervals set.

Usage

gintervals.is.bigset(intervals.set = NULL)

Arguments

intervals.set

name of an intervals set

Details

This function tests whether 'intervals.set' is a big intervals set. Intervals set is big if it is stored in big intervals set format and given the current limits it cannot be fully loaded into memory.

Memory limit is controlled by 'gmax.data.size' option (see: 'getOption("gmax.data.size")').

Value

'TRUE' if intervals set is big, otherwise 'FALSE'.

See Also

gintervals.load, gintervals.save, gintervals.exists, gintervals.ls

Examples

gdb.init_examples()
gintervals.is.bigset("annotations")

misha documentation built on Sept. 14, 2023, 5:08 p.m.