Files in mpwR

Standardized Comparison of Workflows in Mass Spectrometry-Based Bottom-Up Proteomics

NEWS.md README.md R/get_Upset_list.R R/load_experimental_design.R R/plot_ID_barplot.R R/get_DC_Report.R R/utils_viz.R R/get_CV_LFQ_pep.R R/plot_Upset.R R/utils_import.R R/get_CV_LFQ_pg.R R/write_generic_template.R R/get_MC_Report.R R/write_experimental_design.R R/get_ID_Report.R R/plot_MC_barplot.R R/plot_ID_boxplot.R R/plot_radarchart.R R/plot_DC_barplot.R R/plot_CV_density.R R/prepare_mpwR.R R/create_example.R R/get_CV_RT.R R/get_summary_Report.R R/plot_MC_stacked_barplot.R R/utils_helpers.R R/utils_reports.R R/plot_DC_stacked_barplot.R inst/doc/Requirements.Rmd inst/doc/Workflow.R inst/doc/Workflow.Rmd inst/doc/Import.R inst/doc/Requirements.R inst/doc/Output_Explanations.R inst/doc/Output_Explanations.Rmd inst/doc/Import.Rmd tests/testthat.R tests/testthat/test_ID.R tests/testthat/test_utils_import.R tests/testthat/test_Upset.R tests/testthat/test_summary.R tests/testthat/test_Radarchart.R tests/testthat/test_MC.R tests/testthat/test_CV.R tests/testthat/test_DC.R tests/testthat/test_utils_viz.R tests/testthat/test_utils_helpers.R tests/testthat/test_utils_reports.R vignettes/Requirements.Rmd vignettes/Workflow.Rmd vignettes/Output_Explanations.Rmd vignettes/Import.Rmd man/get_CV_LFQ_pg.Rd man/load_experimental_design.Rd man/plot_radarchart.Rd man/get_CV_LFQ_pep.Rd man/plot_MC_stacked_barplot.Rd man/get_MC_Report.Rd man/get_Upset_list.Rd man/plot_MC_barplot.Rd man/write_experimental_design.Rd man/get_ID_Report.Rd man/get_CV_RT.Rd man/create_example.Rd man/plot_ID_boxplot.Rd man/plot_DC_barplot.Rd man/get_DC_Report.Rd man/plot_DC_stacked_barplot.Rd man/prepare_mpwR.Rd man/write_generic_template.Rd man/plot_CV_density.Rd man/plot_Upset.Rd man/get_summary_Report.Rd man/plot_ID_barplot.Rd