Files in nosoi
A Forward Agent-Based Transmission Chain Simulator
MD5
NAMESPACE
DESCRIPTION
R/single-continuous.R
R/output_utilityFunctions.R
R/nosoiSim.R
R/nosoi_tablesManagment.R
R/dual-discrete.R
R/nosoi_sanityChecks-Messages.R
R/nosoi_step2-MeetTransmit.R
R/output_nosoiSummary.R
R/nosoi_step1-makeMoves.R
R/single-discrete.R
R/dual-continuous.R
R/nosoi_utilityFunctions.R
R/output_treeGenerator.r
R/single-none.R
R/dual-none.R
inst/WORDLIST
inst/doc/discrete.Rmd
inst/doc/none.R
inst/doc/output.R
inst/doc/nosoi.html
inst/doc/output.Rmd
inst/doc/continuous.R
inst/doc/nosoi.Rmd
inst/doc/none.html
inst/doc/continuous.html
inst/doc/nosoi.R
inst/doc/continuous.Rmd
inst/doc/discrete.html
inst/doc/output.html
inst/doc/discrete.R
inst/doc/none.Rmd
build/vignette.rds
tests/testthat.R
tests/testthat/testErrors.R
tests/testthat/testTransmissionTree.R
tests/testthat/testParsing.R
tests/testthat/testSingleNone.R
tests/testthat/testSingleContinuous.R
tests/testthat/testDualDiscrete.R
tests/testthat/testDualNone.R
tests/testthat/testDualContinuous.R
tests/testthat/testSingleDiscrete.R
vignettes/discrete.Rmd
vignettes/output.Rmd
vignettes/nosoi.Rmd
vignettes/continuous.Rmd
vignettes/none.Rmd
man/getCumulative.Rd
man/makeMoves.Rd
man/getExitingMoving.Rd
man/getHostData.Rd
man/nosoiSummary.Rd
man/iniTable.Rd
man/RasterSanityChecks.Rd
man/get_state.Rd
man/nosoiSimOneConstructor.Rd
man/paramConstructor.Rd
man/get_node.Rd
man/sampleTransmissionTree.Rd
man/keep.tip.treedata.Rd
man/getTableState.Rd
man/dualContinuous.Rd
man/CoreSanityChecks.Rd
man/get_other_count.Rd
man/add_node_tip.Rd
man/writeInfected.Rd
man/moveFunction.discrete.Rd
man/getTableHosts.Rd
man/applyFunctionToHosts.Rd
man/updateTableState.Rd
man/newLineState.Rd
man/getR0.Rd
man/numberInfectedStates.Rd
man/drawBernouilli.Rd
man/dualDiscrete.Rd
man/nosoiSim.Rd
man/merge_host_tables.Rd
man/MatrixSanityChecks.Rd
man/meetTransmit.Rd
man/getDynamic.Rd
man/numberInfectedBGW.Rd
man/singleDiscrete.Rd
man/endMessage.Rd
man/singleContinuous.Rd
man/dualNone.Rd
man/updateHostCount.Rd
man/moveRotateContinuous.Rd
man/getPositionInfected.Rd
man/progressMessage.Rd
man/sampleTransmissionTreeFromExiting.Rd
man/newLine.Rd
man/numberInfected.Rd
man/FunctionSanityChecks.Rd
man/parseFunction.Rd
man/singleNone.Rd
man/get_position.Rd
man/getTransmissionTree.Rd
man/iniTableState.Rd
man/moveFunction.continuous.Rd
man/nosoiSimConstructor.Rd
man/keepState.Rd
man/cumulativeInfected.Rd
man/figures/logo.png
