dapimask.folder: Automatic DAPI mask segmentation for folder
In nucim: Nucleome Imaging Toolbox
Description
Usage
Arguments
Value
View source: R/dapimask_folder.R
Description
Automatic DAPI mask segmentation for folder
Usage
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dapimask.folder(
path,
folder = "blue",
voxelsize = NULL,
size = NULL,
cores = 1
)
Arguments
path
path to folder with DAPI
folder
folder with DAPI images
voxelsize
real size of voxel (in microns), if NULL (default), look in folder XYZmic
size
real size of image (in microns), if NULL (default), look in folder XYZmic
cores
number of cores to use in parallel (need parallel package)
Value
nothing, results are in folder dapimask
nucim documentation built on June 10, 2021, 9:07 a.m.
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Description Usage Arguments Value
View source: R/dapimask_folder.R
Description
Automatic DAPI mask segmentation for folder
Usage
1 2 3 4 5 6 7 | dapimask.folder(
path,
folder = "blue",
voxelsize = NULL,
size = NULL,
cores = 1
)
|
Arguments
path |
path to folder with DAPI |
folder |
folder with DAPI images |
voxelsize |
real size of voxel (in microns), if NULL (default), look in folder XYZmic |
size |
real size of image (in microns), if NULL (default), look in folder XYZmic |
cores |
number of cores to use in parallel (need parallel package) |
Value
nothing, results are in folder dapimask
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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