dapimask: Mask DAPI in kernel
In nucim: Nucleome Imaging Toolbox

Description Usage Arguments Value

View source: R/dapimask.R

Mask DAPI in kernel

dapimask(
  img,
  size = NULL,
  voxelsize = NULL,
  thresh = "auto",
  silent = TRUE,
  cores = 1
)

`img`	DAPI channel image (3d)
`size`	size of img in microns
`voxelsize`	size of voxel in microns
`thresh`	threshold for intensity. Can be "auto": function will try to find automatic threshold
`silent`	Keep silent?
`cores`	number of cores available for parallel computing

mask image, array with same dimension as img.

nucim documentation built on June 10, 2021, 9:07 a.m.

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README.md Chromatin compaction classification using DAPI intensity Workflow on a folder

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