get_allele_bulk: Aggregate into pseudobulk alelle profile
In numbat: Haplotype-Aware CNV Analysis from scRNA-Seq
get_allele_bulk R Documentation
Aggregate into pseudobulk alelle profile
Description
Aggregate into pseudobulk alelle profile
Usage
get_allele_bulk(df_allele, nu = 1, min_depth = 0)
Arguments
df_allele
dataframe Single-cell allele counts
nu
numeric Phase switch rate
min_depth
integer Minimum coverage to filter SNPs
Value
dataframe Pseudobulk allele profile
numbat documentation built on Feb. 4, 2026, 9:07 a.m.
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| get_allele_bulk | R Documentation |
Aggregate into pseudobulk alelle profile
Description
Aggregate into pseudobulk alelle profile
Usage
get_allele_bulk(df_allele, nu = 1, min_depth = 0)
Arguments
df_allele |
dataframe Single-cell allele counts |
nu |
numeric Phase switch rate |
min_depth |
integer Minimum coverage to filter SNPs |
Value
dataframe Pseudobulk allele profile
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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