get_exp_sc: get the single cell expression dataframe
In numbat: Haplotype-Aware CNV Analysis from scRNA-Seq
get_exp_sc R Documentation
get the single cell expression dataframe
Description
get the single cell expression dataframe
Usage
get_exp_sc(segs_consensus, count_mat, gtf, segs_loh = NULL)
Arguments
segs_consensus
dataframe Consensus segments
count_mat
dgCMatrix gene expression count matrix
gtf
dataframe Transcript gtf
Value
dataframe single cell expression counts annotated with segments
numbat documentation built on Feb. 4, 2026, 9:07 a.m.
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| get_exp_sc | R Documentation |
get the single cell expression dataframe
Description
get the single cell expression dataframe
Usage
get_exp_sc(segs_consensus, count_mat, gtf, segs_loh = NULL)
Arguments
segs_consensus |
dataframe Consensus segments |
count_mat |
dgCMatrix gene expression count matrix |
gtf |
dataframe Transcript gtf |
Value
dataframe single cell expression counts annotated with segments
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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