get_segs_consensus: Extract consensus CNV segments
In numbat: Haplotype-Aware CNV Analysis from scRNA-Seq
get_segs_consensus R Documentation
Extract consensus CNV segments
Description
Extract consensus CNV segments
Usage
get_segs_consensus(bulks, min_LLR = 5, min_overlap = 0.45, retest = TRUE)
Arguments
bulks
dataframe Pseudobulks
min_LLR
numeric LLR threshold to filter CNVs
min_overlap
numeric Minimum overlap fraction to determine count two events as as overlapping
Value
dataframe Consensus segments
numbat documentation built on May 29, 2024, 1:29 a.m.
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| get_segs_consensus | R Documentation |
Extract consensus CNV segments
Description
Extract consensus CNV segments
Usage
get_segs_consensus(bulks, min_LLR = 5, min_overlap = 0.45, retest = TRUE)
Arguments
bulks |
dataframe Pseudobulks |
min_LLR |
numeric LLR threshold to filter CNVs |
min_overlap |
numeric Minimum overlap fraction to determine count two events as as overlapping |
Value
dataframe Consensus segments
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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