test_multi_allelic: test for multi-allelic CNVs
In numbat: Haplotype-Aware CNV Analysis from scRNA-Seq
test_multi_allelic R Documentation
test for multi-allelic CNVs
Description
test for multi-allelic CNVs
Usage
test_multi_allelic(bulks, segs_consensus, min_LLR = 5, p_min = 0.999)
Arguments
bulks
dataframe Pseudobulk profiles
segs_consensus
dataframe Consensus segments
min_LLR
numeric CNV LLR threshold to filter events
p_min
numeric Probability threshold to call multi-allelic events
Value
dataframe Consensus segments annotated with multi-allelic events
numbat documentation built on May 29, 2024, 1:29 a.m.
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| test_multi_allelic | R Documentation |
test for multi-allelic CNVs
Description
test for multi-allelic CNVs
Usage
test_multi_allelic(bulks, segs_consensus, min_LLR = 5, p_min = 0.999)
Arguments
bulks |
dataframe Pseudobulk profiles |
segs_consensus |
dataframe Consensus segments |
min_LLR |
numeric CNV LLR threshold to filter events |
p_min |
numeric Probability threshold to call multi-allelic events |
Value
dataframe Consensus segments annotated with multi-allelic events
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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