remove_inds: Remove individuals from the onemap object
In onemap: Construction of Genetic Maps in Experimental Crosses

remove_inds

R Documentation

Remove individuals from the onemap object

Remove individuals from the onemap object

remove_inds(onemap.obj, rm.ind)

`onemap.obj`	object of class onemap
`rm.ind`	vector of characters with individuals names

An object of class onemap without the selected individuals, i.e., a list with the following components:

`geno`	a matrix with integers indicating the genotypes read for each marker. Each column contains data for a marker and each row represents an individual.
`n.ind`	number of individuals.
`n.mar`	number of markers.
`segr.type`	a vector with the segregation type of each marker, as `strings`.
`segr.type.num`	a vector with the segregation type of each marker, represented in a simplified manner as integers, i.e. 1 corresponds to markers of type `"A"`; 2 corresponds to markers of type `"B1.5"`; 3 corresponds to markers of type `"B2.6"`; 4 corresponds to markers of type `"B3.7"`; 5 corresponds to markers of type `"C.8"`; 6 corresponds to markers of type `"D1"` and 7 corresponds to markers of type `"D2"`. Markers for F2 intercrosses are coded as 1; all other crosses are left as `NA`.
`input`	the name of the input file.
`n.phe`	number of phenotypes.
`pheno`	a matrix with phenotypic values. Each column contains data for a trait and each row represents an individual.