API for ontologySimilarity
Calculating Ontological Similarities
| Global functions | |
|---|---|
| GO_IC | Man page |
| calc_term_sim_mat | Source code |
| check_pop_sim_class | Source code |
| components_for_calc_sim_from_ic | Source code |
| create_sim_index | Man page Source code |
| descendants_IC | Man page Source code |
| gene_GO_terms | Man page |
| get_asym_sim_grid | Man page Source code |
| get_c_group_inds | Source code |
| get_profile_sims | Man page Source code |
| get_sim | Man page Source code |
| get_sim.default | Man page Source code |
| get_sim.integer | Man page Source code |
| get_sim.matrix | Man page Source code |
| get_sim.numeric | Man page Source code |
| get_sim.sim_index | Man page Source code |
| get_sim_grid | Man page Source code |
| get_sim_grid_from_ic | Source code |
| get_sim_grid_from_tsm | Source code |
| get_sim_p | Man page Source code |
| get_sim_p.default | Man page Source code |
| get_sim_p.integer | Man page Source code |
| get_sim_p.matrix | Man page Source code |
| get_sim_p.numeric | Man page Source code |
| get_sim_p.sim_index | Man page Source code |
| get_sim_p_from_ontology | Man page Source code |
| get_similarity_rank_matrix | Man page Source code |
| get_term_set_to_term_sims | Man page Source code |
| get_term_sim_mat | Man page Source code |
| group_sim | Source code |
| group_term_enrichment | Man page Source code |
| lin | Man page Source code |
| lin_asym | Source code |
| ontologySimilarity | Man page |
| ontologySimilarity-package | Man page |
| resnik | Man page Source code |
| resnik_asym | Source code |
| sample_group_sim | Man page Source code |
| sample_group_sim.default | Man page Source code |
| sample_group_sim.integer | Man page Source code |
| sample_group_sim.matrix | Man page Source code |
| sample_group_sim.numeric | Man page Source code |
| sample_group_sim.sim_index | Man page Source code |
| sample_group_sim_from_ontology | Man page Source code |
| sample_null | Source code |
| sim_grid | Source code |
| sim_grid_ic | Source code |
| sim_p | Source code |
