Description Usage Arguments Value See Also
Get matrix of pairwise similarity of individual terms based on Lin's (default) or Resnik's information contentbased expression.
1 2 3  get_term_sim_mat(ontology, information_content, method = "lin",
row_terms = names(information_content),
col_terms = names(information_content))

ontology 

information_content 
Numeric vector of information contents of terms (named by term) 
method 
Character value equalling either "lin" or "resnik" to use Lin or Resnik's expression for similarity of terms respectively. 
row_terms 
Character vector of term IDs to appear as rows of result matrix. 
col_terms 
Character vector of term IDs to appear as cols of result matrix. 
Numeric matrix of pairwise term similarities.
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