sample_group_sim: Draw sample of group similarities

In ontologySimilarity: Calculating Ontological Similarities

Draw sample of group similarities

Description

Draw sample of group similarities of groups of given size

Usage

sample_group_sim(pop_sim, ...)

## S3 method for class 'integer'
sample_group_sim(pop_sim, ...)

## S3 method for class 'numeric'
sample_group_sim(pop_sim, ...)

## S3 method for class 'matrix'
sample_group_sim(pop_sim, ...)

## S3 method for class 'sim_index'
sample_group_sim(pop_sim, ...)

## Default S3 method:
sample_group_sim(
  pop_sim,
  type,
  group_size,
  group_sim = "average",
  sample_size = 10000,
  ...
)

Arguments

pop_sim	An object representing the similarities of an indexed population of objects.
...	Other arguments to be passed to sample_group_sim.
type	Either "matrix", "sim_index" or "numeric" - the type of the pop_sim object.
group_size	Integer giving the number of members of a group.
group_sim	String Either "average" or "min", determining how to calculate the similarity of a group of term sets over all pairwise combinations of group members
sample_size	Number of samples to draw.

Value

Numeric vector of random group similarities.

See Also

get_sim get_sim_p

ontologySimilarity documentation built on May 29, 2024, 3:51 a.m.