R/AngGym.R

In orthGS: Orthology vs Paralogy Relationships among Glutamine Synthetase from Plants

#' Angiosperms Gymnosperms 
#'
#' @format
#' A dataframe with 155 rows (GS proteins) and 10 columns:
#' \describe{
#'		\item{n}{Reference number}
#'		\item{phylo_id}{Unique identification label of the protein/gen}
#'		\item{species}{Species}
#'		\item{taxon}{Acrogymnospermae or Angiospermae}
#'		\item{class}{Angiosperms: Amborellopsida, Liliopsida, Magnoliopsida; Gymnosperms: Ginkgoopsida, Cycadopsida, Gnetopsida, Pinopsida}
#'		\item{dna}{CDS sequence}
#'		\item{prot}{Protein sequence}
#'		\item{short}{Unique three letter identification of the species}
#'		\item{gsLineage}{Either GS2, GS1a or GS1b}
#'		\item{plant_group}{Primitive angiosperms, Modern angiosperms, Ginkgo-Cycadales, Gnetales, Pinacea, Conifer II}
#' }
#' @source
#' It has been manually curated by the authors
"AngGym"