API for otuSummary
Summarizing OTU Table Regarding the Composition, Abundance and Beta Diversity of Abundant and Rare Biospheres
| Global functions | |
|---|---|
| MEAN | Source code |
| SUM | Source code |
| SWEEP | Source code |
| alphaDiversity | Man page Source code |
| bplot | Man page Source code |
| calc_bc | Man page Source code |
| calc_chao1 | Source code |
| calc_chao2 | Source code |
| calc_shannon | Source code |
| calc_simpson | Source code |
| contrib | Man page Source code |
| fillTax | Man page Source code |
| fillTax2 | Man page Source code |
| matrixConvert | Man page Source code |
| otu4type | Man page |
| otuCollap | Man page Source code |
| otuReport | Man page Source code |
| otumothur | Man page |
| otuqiime | Man page |
| pbray | Man page Source code |
| rareBiosphere | Man page Source code |
| seperation | Source code |
| slimTax | Man page Source code |
| subOTU | Man page Source code |
| typeConvert | Man page Source code |
