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README.md
In otuSummary: Summarizing OTU Table Regarding the Composition, Abundance and Beta Diversity of Abundant and Rare Biospheres
otuSummary
R package of 'otuSummary'
This package contains some functions which summarize the taxonomic composition, diversity at given taxonomic level, the contribution to beta diversity (Bray-Curtis dissimilarity) of the rare and abundant biospheres by using the OTU table which was generated either by qiime or mothur.
How to install this package from github?
if(!require(devtools)){
install.packages("devtools")
library(devtools)
} else {library(devtools)
}
install_github("cam315/otuSummary")
Check function list
library("otuSummary")
lsf.str("package:otuSummary")
About citation
citation("otuSummary")
Comments or suggestions
If you have any comments or suggestions, please do not be hesitate to post on my github or drop email to me.
Try the otuSummary package in your browser
Any scripts or data that you put into this service are public.
otuSummary documentation built on Sept. 8, 2023, 6:05 p.m.
R Package Documentation
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
otuSummary
R package of 'otuSummary'
This package contains some functions which summarize the taxonomic composition, diversity at given taxonomic level, the contribution to beta diversity (Bray-Curtis dissimilarity) of the rare and abundant biospheres by using the OTU table which was generated either by qiime or mothur.
How to install this package from github?
if(!require(devtools)){
install.packages("devtools")
library(devtools)
} else {library(devtools)
}
install_github("cam315/otuSummary")
Check function list
library("otuSummary")
lsf.str("package:otuSummary")
About citation
citation("otuSummary")
Comments or suggestions
If you have any comments or suggestions, please do not be hesitate to post on my github or drop email to me.
Try the otuSummary package in your browser
Any scripts or data that you put into this service are public.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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