PlotDistro: Plot a value relative to a background distribution from a...
In palmid: RdRP Analysis Suite

Description Usage Arguments Value Examples

Plot a value relative to a background distribution from a palmprint data.frame.

PlotDistro(
  pp,
  pp.bg,
  plotValue,
  distrocol = "skyblue",
  set.ylab = "palmDB density"
)

`pp`	A palmprint.df row to use for the plot "value"
`pp.bg`	A multiple palmprint.df for the plot background "distribution"
`plotValue`	Which numeric column to use for pp and pp.bg. One of "score", "pssm_total_score", "pp_length", "v1_length", "v2_length"
`distrocol`	Color to use for distribution ["skyblue"]
`set.ylab`	Label for y-axis ["palmDB density"]

A ggplot2 object

data("waxsys.palmprint")
data("palmdb")

PlotDistro( pp = waxsys.palmprint, pp.bg = palmdb, "score", "black")
PlotDistro( pp = waxsys.palmprint, pp.bg = palmdb, "pp_length", "skyblue")