PlotTaxHist: Plot Percent-identity, factored on taxonomic strings of a pro...
In palmid: RdRP Analysis Suite
Description
Usage
Arguments
Value
Examples
Description
Plot Percent-identity, factored on taxonomic strings of a pro df
Usage
1
PlotTaxHist(pro.pident, pro.tax, rank = NA)
Arguments
pro.pident
numeric, pident column from pro.df
pro.tax
character, tax column from pro.df (use: get.tax)
rank
character, string of tax-rank to label graph
Value
A histogram as a ggplot2 object
Examples
1
2
3
4
5
data("waxsys.pro.df")
taxHist <- PlotTaxHist(pro.pident = waxsys.pro.df$pident,
pro.tax = waxsys.pro.df$tfam,
rank = "family")
palmid documentation built on Oct. 15, 2021, 9:06 a.m.
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Description Usage Arguments Value Examples
Description
Plot Percent-identity, factored on taxonomic strings of a pro df
Usage
1 | PlotTaxHist(pro.pident, pro.tax, rank = NA)
|
Arguments
pro.pident |
numeric, pident column from pro.df |
pro.tax |
character, tax column from pro.df (use: get.tax) |
rank |
character, string of tax-rank to label graph |
Value
A histogram as a ggplot2 object
Examples
1 2 3 4 5 | data("waxsys.pro.df")
taxHist <- PlotTaxHist(pro.pident = waxsys.pro.df$pident,
pro.tax = waxsys.pro.df$tfam,
rank = "family")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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