as.adjacencyList: Uses a adjacency matrix to create a adjacency list
In pathClass: Classification using biological pathways as prior knowledge

Uses a adjacency matrix to create a adjacency list as needed for fit.networkBasedSVM.

1 2	as.adjacencyList(adjacency.matrix, skip.redundant.nodes = TRUE, is.directed = FALSE)

`adjacency.matrix`	a adjacency matrix.
`skip.redundant.nodes`	if `TRUE` and the graph is undirected only the upper triangular matrix (including the diagonal) is used to create the adjacency list.
`is.directed`	determines wether or not the graph is directed.

an adjacency list.

## Not run: 
library(pathClass)
data(adjacency.matrix)
ad.list <- as.adjacencyList(adjacency.matrix)

## End(Not run)

pathClass documentation built on May 29, 2017, 11:44 p.m.

pathClass index

Package overview

Note that we can't provide technical support on individual packages. You should contact the package authors for that.

Description