desummarize.ranks: Desummarize GeneRanks back to the corresponding probesets
In pathClass: Classification using biological pathways as prior knowledge
Description
Usage
Arguments
Value
View source: R/PathwayMethods.R
Description
Desummarize the GeneRanks which were previously
calculated for each node in the underlying biological
network back to the corresponding probesets for the
Reweighted Recursive Feature Elimination (RRFE).
Usage
1
desummarize.ranks(ranks, mapping)
Arguments
ranks
the previously calculated GeneRanks or
PageRanks.
mapping
a matrix or data.frame with 2 columns. The
colnames of mapping have to contain at least 'graphID'
and 'probesetID'.
Value
matrix with 1st comlumn probeIDs 2nd column gene IDs
pathClass documentation built on May 29, 2017, 11:44 p.m.
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Description Usage Arguments Value
View source: R/PathwayMethods.R
Description
Desummarize the GeneRanks which were previously calculated for each node in the underlying biological network back to the corresponding probesets for the Reweighted Recursive Feature Elimination (RRFE).
Usage
1 | desummarize.ranks(ranks, mapping)
|
Arguments
ranks |
the previously calculated GeneRanks or PageRanks. |
mapping |
a matrix or data.frame with 2 columns. The colnames of mapping have to contain at least 'graphID' and 'probesetID'. |
Value
matrix with 1st comlumn probeIDs 2nd column gene IDs
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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