pauwels2014-package: Reproduce numerical experiments
In pauwels2014: Bayesian Experimental Design for Systems Biology.
Description
Details
Author(s)
References
Description
This package gathers functions and pre-computed results to reproduce the results presented in a research paper (see vignette). Scripts are given to compute all results from scratch or to draw pictures based on pre-computed results. Adapting this to other networks would require quite an amount of work. The vignette gives practical examples and points out the functions to modify in order to adapt to other settings.
Details
Package: pauwels-2014
Type: Package
Version: 1.0
Date: 2014-08-20
License: GPL-3
Makes extensive use of ode solver from package deSolve. The vignette provides detailed examples.
Author(s)
Edouard Pauwels
References
Edouard Pauwels, Christian Lajaunie, and Jean-Philippe Vert. A bayesian active learning strategy
for sequential experimental design in systems biology. BMC Systems Biology, 2014. To appear.
Karline Soetaert, Thomas Petzoldt, R. Woodrow Setzer (2010). Solving
Differential Equations in R: Package deSolve Journal of Statistical
Software, 33(9), 1–25. http://www.jstatsoft.org/v33/i09/
pauwels2014 documentation built on May 1, 2019, 6:29 p.m.
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Description Details Author(s) References
Description
This package gathers functions and pre-computed results to reproduce the results presented in a research paper (see vignette). Scripts are given to compute all results from scratch or to draw pictures based on pre-computed results. Adapting this to other networks would require quite an amount of work. The vignette gives practical examples and points out the functions to modify in order to adapt to other settings.
Details
| Package: | pauwels-2014 |
| Type: | Package |
| Version: | 1.0 |
| Date: | 2014-08-20 |
| License: | GPL-3 |
Makes extensive use of ode solver from package deSolve. The vignette provides detailed examples.
Author(s)
Edouard Pauwels
References
Edouard Pauwels, Christian Lajaunie, and Jean-Philippe Vert. A bayesian active learning strategy for sequential experimental design in systems biology. BMC Systems Biology, 2014. To appear.
Karline Soetaert, Thomas Petzoldt, R. Woodrow Setzer (2010). Solving Differential Equations in R: Package deSolve Journal of Statistical Software, 33(9), 1–25. http://www.jstatsoft.org/v33/i09/
R Package Documentation
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We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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