Simulate the kinetics of the system using the ode solver of package
simulate_experiment_no_transform(theta, initial_conditions, knobj)
A parameter vector in physical space to be passed to the solver
A vector of initial conditions to be passed to the solver
A knowledge list. See
The solver parameters are given by the
global_parameters slot of
knobj. The solver will call an executable which is defined in the
src directory of the package under the name
model0_simplified_mrna_rates. The number and order of parameters in
theta and initial conditions in
initial_conditions should correspond to the definition of the dynamical system as described in this file. See the vignette and manual of package
deSolve table with attributes.
1 2 3 4 5 6 7
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