phylo4d-class: phylo4d class

In phylobase: Base Package for Phylogenetic Structures and Comparative Data

Description

S4 class for phylogenetic tree and data.

Objects from the Class

Objects can be created from various trees and a data.frame using the constructor phylo4d, or using new("phylo4d", ...{}) for empty objects.

Author(s)

Ben Bolker, Thibaut Jombart

See Also

coerce-methods for translation functions. The phylo4d-methods constructor. See also the phylo4-methods constructor, the phylo4 class, and the checkPhylo4 function to check the validity of phylo4 trees.

Examples

  example(read.tree, "ape")
  obj <- phylo4d(as(tree.owls.bis,"phylo4"), data.frame(wing=1:3))
  obj
  names(obj)
  summary(obj)

phylobase documentation built on March 26, 2020, 7:44 p.m.