posterior_coal_check: Posterior predictive check for coalescent model

In phylodyn: Statistical Tools for Phylodynamics

Description

Posterior predictive check for coalescent model

Usage

posterior_coal_check(coal_times, samp_times, n_sampled, logpop, grid,
  cap = NULL)

Arguments

coal_times	numeric vector of coalescent times.
samp_times	numeric vector of sampling times.
n_sampled	integer vector of lineages sampled at each sampling time.
logpop	matrix posterior sample of log-effective population sizes.
grid	numeric grid
cap	integer maximum number of posterior samples to use.

phylodyn documentation built on May 29, 2017, 1:28 p.m.