Description Usage Format References
Binary population tree for 29 A. thaliana accessions and A. lyrata, obtained from chromosome 4 using MDL to delimit loci, BUCKy to estimate quartet concordance factors (CFs) and Quartet Max Cut to estimate the tree topology.
1 |
tree object of class phylo. Branch lengths are in coalescent units.
Stenz, Noah W. M., Bret Larget, David A. Baum and Cécile Ané (2015). Exploring tree-like and non-tree-like patterns using genome sequences: An example using the inbreeding plant species Arabidopsis thaliana (L.) Heynh. Systematic Biology, 64(5):809-823.
TICR pipeline: github.com/nstenz/TICR
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