pruningwise.distFromRoot: Calculates node distance from the root in an "pruningwise"...
In phylolm: Phylogenetic Linear Regression
pruningwise.distFromRoot R Documentation
Calculates node distance from the root in
an "pruningwise" tree
Description
Calculates the distance from the root to all nodes, in
a tree whose internal representation is in "pruningwise" order.
Usage
pruningwise.distFromRoot(phy)
Arguments
phy
a phylogenetic tree of type phylo with branch
lengths, already in "pruningwise" order.
Value
a vector of distances, with the original tip labels and internal node names if
internal node names were available, or otherwise named by the node numbers
in phy.
Author(s)
Lam Si Tung Ho
See Also
pruningwise.branching.times, cophenetic.
Examples
tre = reorder(rtree(50),"pruningwise")
pruningwise.distFromRoot(tre)
phylolm documentation built on Oct. 1, 2024, 1:09 a.m.
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| pruningwise.distFromRoot | R Documentation |
Calculates node distance from the root in an "pruningwise" tree
Description
Calculates the distance from the root to all nodes, in a tree whose internal representation is in "pruningwise" order.
Usage
pruningwise.distFromRoot(phy)
Arguments
phy |
a phylogenetic tree of type phylo with branch lengths, already in "pruningwise" order. |
Value
a vector of distances, with the original tip labels and internal node names if
internal node names were available, or otherwise named by the node numbers
in phy.
Author(s)
Lam Si Tung Ho
See Also
pruningwise.branching.times, cophenetic.
Examples
tre = reorder(rtree(50),"pruningwise")
pruningwise.distFromRoot(tre)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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