phyloglm-methods: Methods for class 'phyloglm'.

In phylolm: Phylogenetic Linear Regression

Methods for class 'phyloglm'.

Description

These are method functions for class 'phyloglm'.

Usage

## S3 method for class 'phyloglm'
print(x, digits = max(3, getOption("digits") - 3), ...)
## S3 method for class 'phyloglm'
summary(object, ...)
## S3 method for class 'phyloglm'
residuals(object,type = c("response"), ...)
## S3 method for class 'phyloglm'
vcov(object, ...)
## S3 method for class 'phyloglm'
nobs(object, ...)
## S3 method for class 'phyloglm'
logLik(object, ...)
## S3 method for class 'phyloglm'
AIC(object, k=2, ...)
## S3 method for class 'phyloglm'
plot(x, ...)

Arguments

x	an object of class "phyloglm".
object	an object of class "phyloglm".
digits	number of digits to show in summary method.
type	Currently, only the "response" type is implemented. It returns the raw residuals, that is, the differences between the observed responses and the predicted values. They are phylogenetically correlated.
k	numeric, the penalty per parameter to be used; the default k = 2 is the classical AIC.
...	further arguments to methods.

Author(s)

Lam Si Tung Ho

See Also

phyloglm

phylolm documentation built on Oct. 1, 2024, 1:09 a.m.