setAcceptBy.GeneralInDel: Set the function used for accepting/rejecting indel events
In phylosim: Flexible Simulations of Biological Sequence Evolution

Description Usage Arguments Value Author(s) See Also Examples

Set the function used for accepting/rejecting indel events.

The function object must have the following arguments: process (the caller process), sequence (the target sequence), window (a vector containing the positions affecting acceptance).

1 2	## S3 method for class 'GeneralInDel' setAcceptBy(this, value, ...)

`this`	A GeneralInDel object.
`value`	A function object.
`...`	Not used.

The function object (invisible).

Botond Sipos, Gregory Jordan

For more information see GeneralInDel.

	# create a GeneralInDel object
	# rejecting half of the events
	o<-GeneralInDel(
                   rate=1,
                   propose.by=function(process){return(5)},
                   accept.by=function( ){sample(c(TRUE,FALSE),1)}
                   );
	# set/get the acceptBy function
	setAcceptBy(o,value=function( ){return(FALSE)})	# reject all events
	getAcceptBy(o)
	# set/get acceptBy function via virtual field
	o$acceptBy<-function(){return(TRUE)}		# accept all events
	o$acceptBy