Description Usage Arguments Value Examples
Produces a plot in the form of a micro-titre layout, with colours indicating wells above or below a nominated threshold.
1 |
data |
Vector of numerical values to score |
well |
Vector of well identifiers e.g "A01" |
plate |
Number of wells in complete plate (6, 12, 24, 48, 96, 384 or 1536) |
threshold |
Numerical value of standard deviations from the mean for a well to be classified as a 'hit'. Default it +/- 2 SD |
palette |
RColorBrewer palette |
... |
additional parameters for plot wrappers |
ggplot plot
1 2 3 4 5 6 7 | df <- data.frame(vals = rnorm(1:384),
well = num_to_well(1:384, plate = 384))
hit_map(data = df$vals,
well = df$well,
plate = 384,
threshold = 3)
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