data/xpar.R

In plotMCMC: MCMC Diagnostic Plots

xpar <-
structure(list(R0 = c(475635L, 522618L, 492541L, 425306L, 478304L, 
456935L, 413439L, 425355L, 482899L, 451145L, 464432L, 410244L, 
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613745L, 639104L, 585768L, 596247L, 613504L, 599969L, 633066L, 
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611981L, 519831L, 393636L, 419909L, 525814L, 465183L, 412579L, 
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376288L, 355550L, 370225L, 366821L, 356371L, 361560L, 368138L, 
364739L, 372506L, 370100L, 361621L, 353466L, 339141L, 372980L, 
377689L, 373229L, 371258L, 368778L, 374451L, 360662L, 398217L, 
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381529L, 368826L, 367566L, 372275L, 371252L, 373048L, 409214L, 
413539L, 399995L, 393151L, 389623L, 383720L, 405828L, 437566L, 
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608624L, 606564L, 601850L, 612608L, 604864L, 616118L, 610805L, 
595420L, 606654L, 606537L, 588465L, 581324L, 566304L, 594428L, 
596047L, 605582L, 599275L, 597873L, 584095L, 614531L, 612073L, 
582020L, 559791L, 584395L, 614308L, 578357L, 534135L, 582292L, 
601146L, 600326L, 561033L, 524620L, 546543L, 563089L, 560492L, 
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597894L, 573259L, 527609L, 433566L, 553687L, 551036L, 538175L, 
504928L, 528580L, 571955L, 530927L, 575765L, 582756L, 612877L, 
628657L, 565913L, 577027L, 551931L, 570105L, 569095L, 556626L, 
591306L, 568824L, 533415L, 461153L, 543912L, 571802L, 495936L, 
365067L, 365611L, 369640L, 370108L, 372622L, 374227L, 390753L, 
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405111L, 395723L, 370998L, 375186L, 373817L, 377050L, 424700L, 
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547979L, 586071L, 598224L, 570007L, 553571L, 508180L, 462135L, 
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509071L, 487366L, 396907L, 480629L, 457830L, 495265L, 496497L, 
468971L, 459805L, 482200L, 421574L, 424123L, 441618L, 410177L, 
371280L, 380354L, 422604L, 387128L, 399829L, 393714L, 356075L, 
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367366L, 375393L, 387092L, 355644L, 388084L, 404731L, 373248L, 
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481281L, 396823L, 386076L, 386394L, 418152L, 398802L, 416009L, 
385295L, 425668L, 441384L, 519026L, 463261L, 533862L, 461611L, 
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460401L, 412311L, 432201L, 513830L, 445250L, 446741L, 394286L, 
383779L, 389305L, 400305L, 392659L, 413016L, 383958L, 389419L, 
390095L, 400369L, 396191L, 393462L, 466784L, 503022L, 527213L, 
416178L, 438463L, 479578L, 523847L, 509401L, 459532L, 420479L, 
397493L, 453596L, 433902L, 430462L, 469756L, 453938L, 590643L, 
526800L, 399165L, 391560L, 384152L, 387700L, 367566L, 373237L, 
361159L, 425043L, 398602L, 397010L, 428840L, 462865L, 383090L, 
386663L, 384881L, 366810L, 464583L, 473909L, 516612L, 445016L, 
376222L, 377884L, 374085L, 371256L, 382170L, 380405L, 418713L, 
401783L, 393279L, 395963L, 387596L, 395995L, 414580L, 472716L, 
499978L, 428159L, 424652L, 381320L, 381562L, 370401L, 366348L, 
446186L, 371977L, 361239L, 356010L, 382539L, 355686L, 414946L, 
397626L, 375785L, 375653L, 373322L, 379558L, 382881L, 414635L, 
413596L, 419633L, 385895L, 444044L, 401532L, 405597L, 419531L, 
410086L, 407953L, 473724L, 455440L, 530449L, 573330L, 495544L, 
586312L, 605803L, 603910L, 586716L, 586940L, 600206L, 596742L, 
598325L, 594350L, 588094L, 594729L, 611601L, 601014L, 594342L, 
598233L, 608794L, 592048L, 568986L, 582186L, 601697L, 607858L, 
611400L, 614404L, 588938L, 612878L, 603267L, 606444L, 605877L, 
618870L, 592356L, 584143L, 562993L, 584596L, 601107L, 591714L, 
517291L, 558005L, 497274L, 600357L, 581678L, 584014L, 591049L, 
512222L, 496081L, 449852L, 412584L, 390523L, 385498L, 369672L, 
374031L, 387057L, 369736L, 373907L, 373153L, 391337L, 406297L, 
386451L, 391388L, 382694L, 379411L, 377335L, 365828L, 369186L, 
359211L, 405041L, 357818L, 361928L, 360844L, 368700L, 373806L, 
360177L, 375327L, 468375L, 452531L, 529174L, 534636L, 419575L, 
406951L, 421599L, 414219L, 422994L, 413572L, 509731L, 438306L, 
467053L, 434565L, 488884L, 446291L, 508785L, 418241L, 402321L, 
371998L, 378305L, 387549L, 384507L, 367333L, 366414L, 365294L, 
367866L, 390997L, 369322L, 399212L, 392732L, 397997L, 399553L, 
362411L, 371426L, 373482L, 384631L, 442218L, 405563L, 369582L, 
378042L, 454987L, 395563L, 400269L, 434114L, 508361L, 429761L, 
464654L), Rinit = c(0.662874, 0.586167, 0.572374, 0.59738, 0.518515, 
0.522718, 0.619931, 0.654368, 0.579255, 0.55457, 0.541415, 0.614023, 
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0.803056, 0.661755, 0.702472, 0.700758, 0.769551, 0.752362, 0.677604, 
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0.69304, 0.593762, 0.734275, 0.717039, 0.603043, 0.58117, 0.62737, 
0.75106, 0.761829, 0.499429, 0.515318, 0.553522, 0.554508, 0.491261, 
0.489905, 0.553706, 0.538658, 0.509507, 0.517724, 0.531554, 0.596369, 
0.781117, 0.766333, 0.503052, 0.737098, 0.494155, 0.65328, 0.686409, 
0.708038, 0.629811, 0.774209, 0.783668, 0.796057, 0.779961, 0.831243, 
0.817595, 0.723834, 0.714386, 0.782187, 0.800821, 0.825895, 0.54065, 
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0.858107, 0.847493, 0.9048, 0.912766, 0.846828, 0.860382, 0.881346, 
0.9085, 0.866909, 0.789887, 0.782482, 0.886393, 0.927447, 0.751739, 
0.830266, 0.722364, 0.898982, 0.849192, 0.755087, 0.79184, 0.757951, 
0.693831, 0.680285, 0.982717, 0.979784, 0.932471, 0.788586, 0.773196, 
0.77327, 0.560387, 0.48378, 0.512637, 0.470204, 0.467594, 0.571819, 
0.618922, 0.817268, 0.934257, 0.888448, 0.862215, 0.837362, 0.787802, 
0.803367, 0.728424, 0.607886, 0.672556, 0.642421, 0.554753, 0.647081, 
0.706443, 0.637981, 0.865763, 0.8314, 0.92527, 0.859335, 0.85018, 
0.814054, 0.912289, 0.896057, 0.933882, 0.941107, 0.913025, 0.892507, 
0.715896, 0.537627, 0.578961, 0.57561, 0.496033, 0.702988, 0.738757, 
0.698465, 0.662485, 0.801527, 0.783432, 0.827298, 0.649212, 0.503392, 
0.495871, 0.657638, 0.911157, 0.9042, 0.872679, 0.812275, 0.909766, 
0.897938, 0.844846, 0.807737, 0.798055, 0.866471, 0.740706, 0.752618, 
0.801246, 0.857476, 0.896656, 0.911134, 0.906905, 0.902553, 0.828142, 
0.879457, 0.889786, 0.883289, 0.901029, 0.91787, 0.873822, 0.792841, 
0.679627, 0.846561, 0.919839, 0.838847, 0.898956, 0.867231, 0.927186, 
0.846505, 0.781778, 0.919657, 0.921722, 0.928506, 0.921858, 0.914627, 
0.91622, 0.937131, 0.721515, 0.850064, 0.667863, 0.745846, 0.537315, 
0.591137, 0.675909, 0.691373, 0.670652, 0.57677, 0.507163, 0.502153, 
0.547263, 0.608107, 0.66033, 0.9404, 0.955662, 0.875713, 0.973441, 
0.999658, 0.93013, 0.975787, 0.846927, 0.725883, 0.815607, 0.702363, 
0.712569, 0.756137, 0.78893, 0.808575, 0.703824, 0.583861, 0.519809, 
0.500915, 0.510279, 0.562527, 0.636034, 0.68161, 0.494826, 0.631457, 
0.892646, 0.940844, 0.907033, 0.935396, 0.904665, 0.928601, 0.868934, 
0.889163, 0.93108, 0.816711, 0.856287, 0.854644, 0.913599, 0.846065, 
0.831628, 0.90895, 0.916506, 0.901655, 0.951407, 0.898023, 0.878044, 
0.871218, 0.68672, 0.562434, 0.548671, 0.579357, 0.511741, 0.492391, 
0.510323, 0.666226, 0.57794, 0.554498, 0.561752, 0.595423, 0.512903, 
0.57647, 0.903398, 0.656885, 0.61177, 0.708792, 0.646879, 0.601976, 
0.5644, 0.483177, 0.481125, 0.485278, 0.592765, 0.593959, 0.711184, 
0.591732, 0.658793, 0.498711, 0.482265, 0.471847, 0.505691, 0.447278, 
0.483026, 0.499461, 0.601849, 0.532863, 0.484204, 0.503501, 0.472925, 
0.485213, 0.538027, 0.531075, 0.589718, 0.79139, 0.75591, 0.841265, 
0.986251, 0.909676, 0.795231, 0.460289, 0.48392, 0.49517, 0.500442, 
0.477596, 0.50144, 0.500747, 0.467184, 0.479025, 0.474291, 0.482714, 
0.496788, 0.462363, 0.437337, 0.442972, 0.449013, 0.455207, 0.454361, 
0.458194, 0.459486, 0.449476, 0.498356, 0.520167, 0.475875, 0.55839, 
0.494495, 0.467562, 0.474908, 0.494547, 0.492776, 0.439227, 0.478275, 
0.476111, 0.504357, 0.505563, 0.475969, 0.518743, 0.478564, 0.593561, 
0.481429, 0.459358, 0.472551, 0.493704, 0.467096, 0.485475, 0.477893, 
0.463764, 0.476248, 0.518613, 0.502426, 0.486013, 0.470846, 0.47434, 
0.46521, 0.48161, 0.488142, 0.520331, 0.590026, 0.524053, 0.545177, 
0.548476, 0.528898, 0.588512, 0.54798, 0.47749, 0.557734, 0.862679, 
0.863311, 0.883221, 0.934004, 0.895291, 0.94642, 0.955223, 0.906639, 
0.634168, 0.882581, 0.789523, 0.876365, 0.89459, 0.900424, 0.855403, 
0.873837, 0.911998, 0.917789, 0.891853, 0.824187, 0.88184, 0.873957, 
0.796126, 0.664397, 0.81181, 0.813624, 0.671967, 0.690226, 0.786952, 
0.629233, 0.747999, 0.735774, 0.700129, 0.572849, 0.679828, 0.528897, 
0.544319, 0.758753, 0.739346, 0.702321, 0.790935, 0.716539, 0.497071, 
0.454516, 0.432893, 0.468433, 0.482737, 0.507468, 0.530456, 0.476819, 
0.473723, 0.513874, 0.547567, 0.507071, 0.45487, 0.520761, 0.522956, 
0.47363, 0.441656, 0.446773, 0.443792, 0.449729, 0.429922, 0.505938, 
0.616981, 0.556315, 0.723703, 0.791665, 0.615515, 0.713846, 0.788545, 
0.834418, 0.770487, 0.763914, 0.783282, 0.769652, 0.80061, 0.904963, 
0.903564, 0.885296, 0.887985, 0.840897, 0.890614, 0.905201, 0.935492, 
0.916577, 0.914125, 0.846694, 0.687208, 0.680424, 0.637907, 0.68438, 
0.794128, 0.77971, 0.746045, 0.819441, 0.738522, 0.870996, 0.933341, 
0.853217, 0.836534, 0.849254, 0.893219, 0.874757, 0.941193, 0.905158, 
0.966687, 0.96822, 0.882296, 0.889608, 0.943528, 0.919173, 0.868621, 
0.921909, 0.942602, 0.837123, 0.545694, 0.555913, 0.651855, 0.655272, 
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