API for pomp
Statistical Inference for Partially Observed Markov Processes

Global functions
%>% Man page
Abc-class Man page
Csnippet Man page
Csnippet-class Man page
LondonYorke Man page
Mif2-class Man page
Pfilter-class Man page
Pmcmc-class Man page
Pomp-class Man page
[,listie-method Man page
[-listie Man page
abc Man page
abc,ANY-method Man page
abc,abcd_pomp-method Man page
abc,data.frame-method Man page
abc,missing-method Man page
abc,pomp-method Man page
abc,probed_pomp-method Man page
abc-data.frame Man page
abc-pomp Man page
abcList-class Man page
accumulators Man page
accumvars Man page
as,Csnippet-method Man page
as,bsmcd_pomp-method Man page
as,kalmand_pomp-method Man page
as,listie-method Man page
as,pfilterd_pomp-method Man page
as,probed_pomp-method Man page
as,wpfilterd_pomp-method Man page
as-csnippet Man page
as.character.Csnippet Source code
as.data.frame Man page
as.data.frame.abcList Man page
as.data.frame.bsmcd_pomp Man page
as.data.frame.kalmand_pomp Man page
as.data.frame.mif2List Man page
as.data.frame.pfilterList Man page
as.data.frame.pfilterd_pomp Man page
as.data.frame.pmcmcList Man page
as.data.frame.pomp Man page
as.data.frame.pompList Man page
as.data.frame.probed_pomp Man page
as.data.frame.wpfilterd_pomp Man page
as.pomp Man page
bake Man page
basic_components Man page
basic_probes Man page
blowflies Man page
blowflies1 Man page
blowflies2 Man page
bsflu Man page
bsmc2 Man page
bsmc2,ANY-method Man page
bsmc2,data.frame-method Man page
bsmc2,missing-method Man page
bsmc2,pomp-method Man page
bsmc2-data.frame Man page
bsmc2-pomp Man page
bspline.basis Man page
bsplines Man page
c.Abc Man page
c.Mif2 Man page
c.Pfilter Man page
c.Pmcmc Man page
c.Pomp Man page
coef Man page
coef,listie-method Man page
coef,missing-method Man page
coef,objfun-method Man page
coef,pomp-method Man page
coef-listie Man page
coef-objfun Man page
coef-pomp Man page
coef<- Man page
coef<-,missing-method Man page
coef<-,pomp-method Man page
coef<--pomp Man page
coerce,Csnippet,character-method Man page
coerce,bsmcd_pomp,data.frame-method Man page
coerce,kalmand_pomp,data.frame-method Man page
coerce,listie,data.frame-method Man page
coerce,objfun,data.frame-method Man page
coerce,objfun,pomp-method Man page
coerce,pfilterd_pomp,data.frame-method Man page
coerce,pomp,data.frame-method Man page
coerce,probe_match_objfun,probed_pomp-method Man page
coerce,probed_pomp,data.frame-method Man page
coerce,spect_match_objfun,spectd_pomp-method Man page
coerce,wpfilterd_pomp,data.frame-method Man page
coerce-objfun-data.frame Man page
coerce-objfun-pomp Man page
coerce-pomp-data.frame Man page
coerce-probe_match_objfun-probed_pomp Man page
coerce-spect_match_objfun-spectd_pomp Man page
concat Man page
concat,Abc-method Man page
concat,Mif2-method Man page
concat,Pfilter-method Man page
concat,Pmcmc-method Man page
concat,Pomp-method Man page
cond.logLik Man page
cond.logLik,ANY-method Man page
cond.logLik,bsmcd_pomp-method Man page
cond.logLik,kalmand_pomp-method Man page
cond.logLik,missing-method Man page
cond.logLik,pfilterd_pomp-method Man page
cond.logLik,wpfilterd_pomp-method Man page
cond.logLik-bsmcd_pomp Man page
cond.logLik-kalmand_pomp Man page
cond.logLik-pfilterd_pomp Man page
cond.logLik-wpfilterd_pomp Man page
cond.loglik Man page
continue Man page
continue,ANY-method Man page
continue,abcd_pomp-method Man page
continue,mif2d_pomp-method Man page
continue,missing-method Man page
continue,pmcmcd_pomp-method Man page
continue-abcd_pomp Man page
continue-mif2d_pomp Man page
continue-pmcmcd_pomp Man page
covariate_table Man page
covariate_table,ANY-method Man page
covariate_table,character-method Man page
covariate_table,missing-method Man page
covariate_table,numeric-method Man page
covariate_table-character,covariate_table,character-method Man page
covariate_table-numeric,covariate_table,numeric-method Man page
covmat Man page
covmat,ANY-method Man page
covmat,abcList-method Man page
covmat,abcd_pomp-method Man page
covmat,missing-method Man page
covmat,pmcmcList-method Man page
covmat,pmcmcd_pomp-method Man page
covmat,probed_pomp-method Man page
covmat-abcList Man page
covmat-abcd_pomp Man page
covmat-pmcmcList Man page
covmat-pmcmcd_pomp Man page
covmat-probed_pomp Man page
dacca Man page
deprecated Man page
design Man page
deulermultinom Man page
discrete_time Man page
distributions Man page
dmeasure Man page
dmeasure,ANY-method Man page
dmeasure,missing-method Man page
dmeasure,pomp-method Man page
dmeasure-pomp Man page
dmeasure_spec Man page
dprior Man page
dprior,ANY-method Man page
dprior,missing-method Man page
dprior,pomp-method Man page
dprior-pomp Man page
dprocess Man page
dprocess,ANY-method Man page
dprocess,missing-method Man page
dprocess,pomp-method Man page
dprocess-pomp Man page
dprocess_spec Man page
eakf Man page
eakf,ANY-method Man page
eakf,data.frame-method Man page
eakf,missing-method Man page
eakf,pomp-method Man page
eakf-data.frame Man page
eakf-pomp Man page
ebola Man page
ebolaModel Man page
ebolaWA2014 Man page
eff.sample.size Man page
eff.sample.size,ANY-method Man page
eff.sample.size,bsmcd_pomp-method Man page
eff.sample.size,missing-method Man page
eff.sample.size,pfilterd_pomp-method Man page
eff.sample.size,wpfilterd_pomp-method Man page
eff.sample.size-bsmcd_pomp Man page
eff.sample.size-pfilterd_pomp Man page
eff.sample.size-wpfilterd_pomp Man page
elementary_algorithms Man page
enkf Man page
enkf,ANY-method Man page
enkf,data.frame-method Man page
enkf,missing-method Man page
enkf,pomp-method Man page
enkf-data.frame Man page
enkf-pomp Man page
estimation_algorithms Man page
euler Man page
ewcitmeas Man page
ewmeas Man page
expit Man page
filter.mean Man page
filter.mean,ANY-method Man page
filter.mean,kalmand_pomp-method Man page
filter.mean,missing-method Man page
filter.mean,pfilterd_pomp-method Man page
filter.mean-kalmand_pomp Man page
filter.mean-pfilterd_pomp Man page
filter.traj Man page
filter.traj,ANY-method Man page
filter.traj,missing-method Man page
filter.traj,pfilterList-method Man page
filter.traj,pfilterd_pomp-method Man page
filter.traj,pmcmcList-method Man page
filter.traj,pmcmcd_pomp-method Man page
filter.traj-pfilterList Man page
filter.traj-pfilterd_pomp Man page
filter.traj-pmcmcList Man page
filter.traj-pmcmcd_pomp Man page
flow Man page
flow,ANY-method Man page
flow,missing-method Man page
flow,pomp-method Man page
flow-pomp Man page
forecast Man page
forecast,ANY-method Man page
forecast,kalmand_pomp-method Man page
forecast,missing-method Man page
forecast-kalmand_pomp Man page
freeze Man page
gillespie Man page
gillespie_hl Man page
gompertz Man page
hitch Man page
inv_log_barycentric Man page
kalman Man page
listie Man page
listie-class Man page
load Man page
logLik Man page
logLik,ANY-method Man page
logLik,bsmcd_pomp-method Man page
logLik,kalmand_pomp-method Man page
logLik,listie-method Man page
logLik,missing-method Man page
logLik,nlf_objfun-method Man page
logLik,objfun-method Man page
logLik,pfilterd_pomp-method Man page
logLik,pmcmcd_pomp-method Man page
logLik,probed_pomp-method Man page
logLik,spect_match_objfun-method Man page
logLik,wpfilterd_pomp-method Man page
logLik-bsmcd_pomp Man page
logLik-kalmand_pomp Man page
logLik-nlf_objfun Man page
logLik-objfun Man page
logLik-pfilterd_pomp Man page
logLik-pmcmcd_pomp Man page
logLik-probed_pomp Man page
logLik-spect_match_objfun Man page
logLik-wpfilterd_pomp Man page
log_barycentric Man page
logit Man page
logmeanexp Man page
lookup Man page
make.tensorbasis Source code
map Man page
measles Man page
melt Man page
melt,pomp-method Man page
mif2 Man page
mif2,ANY-method Man page
mif2,data.frame-method Man page
mif2,mif2d_pomp-method Man page
mif2,missing-method Man page
mif2,pfilterd_pomp-method Man page
mif2,pomp-method Man page
mif2-data.frame Man page
mif2-mif2d_pomp Man page
mif2-pfilterd_pomp Man page
mif2-pomp Man page
mif2List-class Man page
mvn.diag.rw Man page
mvn.rw Man page
mvn.rw.adaptive Man page
nlf Man page
nlf_objfun Man page
nlf_objfun,ANY-method Man page
nlf_objfun,data.frame-method Man page
nlf_objfun,missing-method Man page
nlf_objfun,nlf_objfun-method Man page
nlf_objfun,pomp-method Man page
nlf_objfun-data.frame Man page
nlf_objfun-nlf_objfun Man page
nlf_objfun-pomp Man page
objfun Man page
obs Man page
obs,pomp-method Man page
obs-pomp Man page
onestep Man page
ou2 Man page
pStop Man page
pStop_ Man page
pWarn Man page
pWarn_ Man page
parameter_trans Man page
parameter_trans,ANY,ANY-method Man page
parameter_trans,ANY,missing-method Man page
parameter_trans,Csnippet,Csnippet-method Man page
parameter_trans,NULL,NULL-method Man page
parameter_trans,character,character-method Man page
parameter_trans,function,function-method Man page
parameter_trans,missing,ANY-method Man page
parameter_trans,missing,missing-method Man page
parameter_trans,pomp_fun,pomp_fun-method Man page
parameter_trans-Csnippet,Csnippet Man page
parameter_trans-character,character Man page
parameter_trans-function,function Man page
parameter_trans-missing,missing Man page
parmat Man page
partrans Man page
partrans,ANY-method Man page
partrans,missing-method Man page
partrans,pomp-method Man page
partrans-pomp Man page
parus Man page
periodic.bspline.basis Man page
pfilter Man page
pfilter,ANY-method Man page
pfilter,data.frame-method Man page
pfilter,missing-method Man page
pfilter,objfun-method Man page
pfilter,pfilterd_pomp-method Man page
pfilter,pomp-method Man page
pfilter-data.frame Man page
pfilter-objfun Man page
pfilter-pfilterd_pomp Man page
pfilter-pomp Man page
pfilterList-class Man page
pfilterd_pomp Man page
pfilterd_pomp-class Man page
pipe Man page
plot Man page
plot,Abc-method Man page
plot,Mif2-method Man page
plot,Pmcmc-method Man page
plot,abcList-method Man page
plot,abcd_pomp-method Man page
plot,bsmcd_pomp-method Man page
plot,mif2List-method Man page
plot,mif2d_pomp-method Man page
plot,missing-method Man page
plot,pfilterd_pomp-method Man page
plot,pmcmcList-method Man page
plot,pmcmcd_pomp-method Man page
plot,pomp-method Man page
plot,pomp_plottable-method Man page
plot,probe_match_objfun-method Man page
plot,probed_pomp-method Man page
plot,spect_match_objfun-method Man page
plot,spectd_pomp-method Man page
plot,wpfilterd_pomp-method Man page
plot-Abc Man page
plot-Mif2 Man page
plot-Pmcmc Man page
plot-bsmcd_pomp Man page
plot-pfilterd_pomp Man page
plot-pomp Man page
plot-probe_match_objfun Man page
plot-probed_pomp Man page
plot-spect_match_objfun Man page
plot-spectd_pomp Man page
plot-wpfilterd_pomp Man page
pmcmc Man page
pmcmc,ANY-method Man page
pmcmc,data.frame-method Man page
pmcmc,missing-method Man page
pmcmc,pfilterd_pomp-method Man page
pmcmc,pmcmcd_pomp-method Man page
pmcmc,pomp-method Man page
pmcmc-data.frame Man page
pmcmc-pfilterd_pomp Man page
pmcmc-pmcmcd_pomp Man page
pmcmc-pomp Man page
pmcmcList-class Man page
pomp Man page
pomp,package Man page
pomp-class Man page
pomp-package Man page
pompExample Man page
pompExamples Man page
pompList-class Man page
pompLoad Man page
pompLoad,pomp-method Man page
pompLoad-pomp Man page
pompUnload Man page
pompUnload,pomp-method Man page
pompUnload-pomp Man page
pomp_example Man page
pomp_examples Man page
pomp_fun Man page
pomp_fun,Csnippet-method Man page
pomp_fun,character-method Man page
pomp_fun,function-method Man page
pomp_fun,missing-method Man page
pomp_fun,pomp_fun-method Man page
pred.mean Man page
pred.mean,ANY-method Man page
pred.mean,kalmand_pomp-method Man page
pred.mean,missing-method Man page
pred.mean,pfilterd_pomp-method Man page
pred.mean-kalmand_pomp Man page
pred.mean-pfilterd_pomp Man page
pred.var Man page
pred.var,ANY-method Man page
pred.var,missing-method Man page
pred.var,pfilterd_pomp-method Man page
pred.var-pfilterd_pomp Man page
print Man page
print,listie-method Man page
print,pomp_fun-method Man page
print,unshowable-method Man page
prior_spec Man page
probe Man page
probe,ANY-method Man page
probe,data.frame-method Man page
probe,missing-method Man page
probe,objfun-method Man page
probe,pomp-method Man page
probe,probe_match_objfun-method Man page
probe,probed_pomp-method Man page
probe-data.frame Man page
probe-objfun Man page
probe-pomp Man page
probe-probe_match_obfjun Man page
probe-probed_pomp Man page
probe.acf Man page
probe.ccf Man page
probe.marginal Man page
probe.match Man page
probe.mean Man page
probe.median Man page
probe.nlar Man page
probe.period Man page
probe.quantile Man page
probe.sd Man page
probe.var Man page
probe_objfun Man page
probe_objfun,ANY-method Man page
probe_objfun,data.frame-method Man page
probe_objfun,missing-method Man page
probe_objfun,pomp-method Man page
probe_objfun,probe_match_objfun-method Man page
probe_objfun,probed_pomp-method Man page
probe_objfun-data.frame Man page
probe_objfun-pomp Man page
probe_objfun-probe_match_objfun Man page
probe_objfun-probed_pomp Man page
profileDesign Man page
profile_design Man page
proposals Man page
reexports Man page
resample Man page
reulermultinom Man page
rgammawn Man page
ricker Man page
rinit Man page
rinit,ANY-method Man page
rinit,missing-method Man page
rinit,pomp-method Man page
rinit-pomp Man page
rinit_spec Man page
rmeasure Man page
rmeasure,ANY-method Man page
rmeasure,missing-method Man page
rmeasure,pomp-method Man page
rmeasure-pomp Man page
rmeasure_spec Man page
rprior Man page
rprior,ANY-method Man page
rprior,missing-method Man page
rprior,pomp-method Man page
rprior-pomp Man page
rprocess Man page
rprocess,ANY-method Man page
rprocess,missing-method Man page
rprocess,pomp-method Man page
rprocess-pomp Man page
rprocess_spec Man page
runifDesign Man page
runif_design Man page
rw.sd Man page
rw2 Man page
sannbox Man page
saved.states Man page
saved.states,ANY-method Man page
saved.states,missing-method Man page
saved.states,pfilterList-method Man page
saved.states,pfilterd_pomp-method Man page
saved.states-pfilterList Man page
saved.states-pfilterd_pomp Man page
show Man page
show,abcd_pomp-method Man page
show,bsmcd_pomp-method Man page
show,covartable-method Man page
show,discreteRprocPlugin-method Man page
show,eulerRprocPlugin-method Man page
show,gillespieRprocPlugin-method Man page
show,kalmand_pomp-method Man page
show,listie-method Man page
show,mapPlugin-method Man page
show,mif2d_pomp-method Man page
show,nlfd_pomp-method Man page
show,onestepRprocPlugin-method Man page
show,partransPlugin-method Man page
show,pfilterd_pomp-method Man page
show,pmcmcd_pomp-method Man page
show,pomp-method Man page
show,pomp_fun-method Man page
show,probed_pomp-method Man page
show,rprocPlugin-method Man page
show,skelPlugin-method Man page
show,spectd_pomp-method Man page
show,unshowable-method Man page
show,vectorfieldPlugin-method Man page
simulate Man page
simulate,data.frame-method Man page
simulate,missing-method Man page
simulate,objfun-method Man page
simulate,pomp-method Man page
simulate-data.frame Man page
simulate-missing Man page
simulate-objfun Man page
simulate-pomp Man page
sir Man page
sir2 Man page
sir_models Man page
skeleton Man page
skeleton,ANY-method Man page
skeleton,missing-method Man page
skeleton,pomp-method Man page
skeleton-pomp Man page
skeleton_spec Man page
sliceDesign Man page
slice_design Man page
sobolDesign Man page
sobol_design Man page
solibs<- Man page
solibs<-,pomp-method Man page
solibs<--pomp Man page
spect Man page
spect,ANY-method Man page
spect,data.frame-method Man page
spect,missing-method Man page
spect,objfun-method Man page
spect,pomp-method Man page
spect,spect_match_objfun-method Man page
spect,spectd_pomp-method Man page
spect-data.frame Man page
spect-objfun Man page
spect-pomp Man page
spect-spect_match_objfun Man page
spect-spectd_pomp Man page
spect.match Man page
spect_objfun Man page
spect_objfun,ANY-method Man page
spect_objfun,data.frame-method Man page
spect_objfun,missing-method Man page
spect_objfun,pomp-method Man page
spect_objfun,spect_match_objfun-method Man page
spect_objfun,spectd_pomp-method Man page
spect_objfun-data.frame Man page
spect_objfun-pomp Man page
spect_objfun-spect_match_objfun Man page
spect_objfun-spectd_pomp Man page
spy Man page
spy,ANY-method Man page
spy,missing-method Man page
spy,pomp-method Man page
states Man page
states,pomp-method Man page
states-pomp Man page
stew Man page
summary Man page
summary,objfun-method Man page
summary,probed_pomp-method Man page
summary,spectd_pomp-method Man page
summary-objfun Man page
summary-probed_pomp Man page
summary-spectd_pomp Man page
systematic_resample Man page
time Man page
time,missing-method Man page
time,pomp-method Man page
time-pomp Man page
time<- Man page
time<-,pomp-method Man page
time<--pomp Man page
timezero Man page
timezero,ANY-method Man page
timezero,missing-method Man page
timezero,pomp-method Man page
timezero-pomp Man page
timezero<- Man page
timezero<-,ANY-method Man page
timezero<-,missing-method Man page
timezero<-,pomp-method Man page
timezero<--pomp Man page
traces Man page
traces,ANY-method Man page
traces,Abc-method Man page
traces,Mif2-method Man page
traces,Pmcmc-method Man page
traces,abcList-method Man page
traces,abcd_pomp-method Man page
traces,mif2List-method Man page
traces,mif2d_pomp-method Man page
traces,missing-method Man page
traces,pmcmcList-method Man page
traces,pmcmcd_pomp-method Man page
traces-Abc Man page
traces-Mif2 Man page
traces-Pmcmc Man page
traces-abcList Man page
traces-abcd_pomp Man page
traces-mif2List Man page
traces-mif2d_pomp Man page
traces-pmcmcList Man page
traces-pmcmcd_pomp Man page
traj.match Man page
traj_objfun Man page
traj_objfun,ANY-method Man page
traj_objfun,data.frame-method Man page
traj_objfun,missing-method Man page
traj_objfun,pomp-method Man page
traj_objfun,traj_match_objfun-method Man page
traj_objfun-data.frame Man page
traj_objfun-pomp Man page
traj_objfun-traj_match_objfun Man page
trajectory Man page
trajectory,ANY-method Man page
trajectory,missing-method Man page
trajectory,pomp-method Man page
trajectory,traj_match_objfun-method Man page
trajectory-pomp Man page
trajectory-traj_match_objfun Man page
transformations Man page
undefined Man page
undefined,pomp_fun-method Man page
undefined,rprocPlugin-method Man page
undefined,skelPlugin-method Man page
userdata Man page
vectorfield Man page
verhulst Man page
window Man page
window,pomp-method Man page
window-pomp Man page
workhorses Man page
wpfilter Man page
wpfilter,ANY-method Man page
wpfilter,data.frame-method Man page
wpfilter,missing-method Man page
wpfilter,pomp-method Man page
wpfilter,wpfilterd_pomp-method Man page
wpfilter-data.frame Man page
wpfilter-pomp Man page
wpfilter-wpfilterd_pomp Man page
wpfilterd_pomp Man page
wpfilterd_pomp-class Man page
pomp documentation built on March 19, 2021, 1:05 a.m.