compute_Ddenom_bjmeans: compute_Ddenom_bjmeans

In poolfstat: Computing f-Statistics and Building Admixture Graphs Based on Allele Count or Pool-Seq Read Count Data

compute_Ddenom_bjmeans

Description

Compute the the block-jackknife mean of Dstat denominator

Usage

.compute_Ddenom_bjmeans(snpQ2, f2idx, snp_bj_id, verbose)

Arguments

snpQ2	the nsnp by (npop*(npop-1))/2 matrix of all pairwise Q2 estimates
f2idx	a matrix of nDstat by 2 giving the index of the Q2 required to compute the Dstat denominator
snp_bj_id	integer vector of length nsnp giving the block index of each SNP
verbose	if TRUE progression bar is printed on the terminal

Details

Compute the the block-jackknife mean of Dstat denominator

Value

Return a vector with the block-jackknife mean estimates of the Dstat denominator

Examples

#

poolfstat documentation built on Sept. 8, 2023, 5:49 p.m.