Description Usage Arguments Value Note Author(s) References See Also
Plot the results of filter_stats
1 2 3 4 5 6 7 8 | plot_filter_stats(
x,
fstats,
distmat,
cols = NULL,
nclone = NULL,
breaks = NULL
)
|
x |
a genlight of genind object |
fstats |
the list passed from |
distmat |
a distance matrix passed from |
cols |
colors to use for each algorithm (defaults to RColorBrewer set 1) |
nclone |
see |
a plot depicting how many MLLs are collapsed as the genetic distance increases for each algorithm.
This function originally appeared in doi: 10.5281/zenodo.17424DOI: 10.5281/zenodo.17424
Zhian N. Kamvar
ZN Kamvar, JC Brooks, and NJ Grünwald. 2015. Supplementary Material for Frontiers Plant Genetics and Genomics 'Novel R tools for analysis of genome-wide population genetic data with emphasis on clonality'. DOI: doi: 10.5281/zenodo.17424
Kamvar ZN, Brooks JC and Grünwald NJ (2015) Novel R tools for analysis of genome-wide population genetic data with emphasis on clonality. Front. Genet. 6:208. doi: doi: 10.3389/fgene.2015.00208
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