Description Usage Arguments Details Value Author(s) References See Also Examples
This function will test for consistency in the sense that all alleles are able to be represented as discrete units after division and rounding.
1 | test_replen(gid, replen)
|
gid |
a |
replen |
a numeric vector of repeat motif lengths. |
This function is modified from the version used in doi: 10.5281/zenodo.13007.
a logical vector indicating whether or not the repeat motif length is consistent.
Zhian N. Kamvar
Zhian N. Kamvar, Meg M. Larsen, Alan M. Kanaskie, Everett M. Hansen, & Niklaus J. Grünwald. Sudden_Oak_Death_in_Oregon_Forests: Spatial and temporal population dynamics of the sudden oak death epidemic in Oregon Forests. ZENODO, doi: 10.5281/zenodo.13007, 2014.
Kamvar, Z. N., Larsen, M. M., Kanaskie, A. M., Hansen, E. M., & Grünwald, N. J. (2015). Spatial and temporal analysis of populations of the sudden oak death pathogen in Oregon forests. Phytopathology 105:982-989. doi: doi: 10.1094/PHYTO-12-14-0350-FI
Ruzica Bruvo, Nicolaas K. Michiels, Thomas G. D'Souza, and Hinrich Schulenburg. A simple method for the calculation of microsatellite genotype distances irrespective of ploidy level. Molecular Ecology, 13(7):2101-2106, 2004.
fix_replen
bruvo.dist
bruvo.msn
bruvo.boot
1 2 3 |
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.