upgma: UPGMA
In poppr: Genetic Analysis of Populations with Mixed Reproduction
upgma R Documentation
UPGMA
Description
UPGMA clustering. Just a wrapper function around hclust.
Usage
upgma(d)
Arguments
d
A distance matrix.
Value
A phylogenetic tree of class phylo.
Author(s)
Klaus Schliep klaus.schliep@gmail.com
See Also
hclust, as.phylo
Examples
library(ape)
data(woodmouse)
dm <- dist.dna(woodmouse)
tree <- upgma(dm)
plot(tree)
poppr documentation built on May 29, 2024, 5:54 a.m.
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| upgma | R Documentation |
UPGMA
Description
UPGMA clustering. Just a wrapper function around hclust.
Usage
upgma(d)
Arguments
d |
A distance matrix. |
Value
A phylogenetic tree of class phylo.
Author(s)
Klaus Schliep klaus.schliep@gmail.com
See Also
hclust, as.phylo
Examples
library(ape)
data(woodmouse)
dm <- dist.dna(woodmouse)
tree <- upgma(dm)
plot(tree)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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