upgma: UPGMA
In poppr: Genetic Analysis of Populations with Mixed Reproduction

UPGMA clustering. Just a wrapper function around hclust.

upgma(d)

`d`	A distance matrix.

A phylogenetic tree of class phylo.

library(ape)
data(woodmouse)
dm <- dist.dna(woodmouse)
tree <- upgma(dm)
plot(tree)

poppr documentation built on Sept. 7, 2021, 9:06 a.m.

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