pheno.plot: View phenotype variables

In postGGIR: Data Processing after Running 'GGIR' for Accelerometer Data

Description

This R script will generate plot for each variable and write description to a log file.

Usage

pheno.plot(
  inputFN,
  outFN = paste("plot_", inputFN, ".pdf", sep = ""),
  csv = TRUE,
  sep = " ",
  start = 3,
  read = TRUE,
  logFN = NULL,
  track = TRUE
)

Arguments

inputFN	character Input file name or input data
outFN	character Output pdf file name for the plots
csv	logical Specify if input file is a CSV file. Default is TRUE.
sep	character Separator between columns. Default is space. If csv=TRUE, this will not be used.
start	number The location of the first phenotype variable starts in the input file.
read	logical Specify if inputFN is a file name or a data. Default is TRUE when inputFN is a file name.
logFN	character File name of the log file. Default is NULL, while logFN=paste(inputFN,".log",sep="") in the function.
track	logical Specify if the intermediate results is printed when the function was executed. Default is TRUE.

Value

Files were written to the current directory. One is .pdf file for plots and the other is .log file for variable description.

postGGIR documentation built on Jan. 6, 2022, 5:08 p.m.