plot-methods-coda: Plotting functions from package 'coda'

In prevalence: Tools for Prevalence Assessment Studies

Plotting functions from package coda

Description

Different plotting functions from package coda have been made available as method to class prev

Usage

## S4 method for signature 'prev'
densplot(x, exclude_fixed = TRUE, ...)

## S4 method for signature 'prev'
traceplot(x, exclude_fixed = TRUE, ...)

## S4 method for signature 'prev'
autocorr.plot(x, exclude_fixed = TRUE, chain = 1, ...)

Arguments

x	An object of class prev
exclude_fixed	Should fixed parameters be excluded from plotting? defaults to TRUE
chain	Which chain to plot in autocorr.plot; defaults to 1
...	Other arguments to pass to the specific plot function.

Methods

signature(x = "prev")

Show density, trace, Brooks-Gelman-Rubin and autocorrelation plots.

See Also

prev-class
plot-methods
densplot, traceplot, gelman.plot, autocorr.plot

prevalence documentation built on June 4, 2022, 1:05 a.m.