create_fgcz_fasta_db: create fasta db from one or more fasta files

In prozor: Minimal Protein Set Explaining Peptide Spectrum Matches

Description

create fasta db from one or more fasta files

Usage

create_fgcz_fasta_db(
  databasedirectory,
  useContaminants = loadContaminantsFasta2021(),
  revLab = "REV_",
  outputdir = NULL
)

Arguments

databasedirectory	directory with fasta files
useContaminants	contaminants to add
revLab	reverse label
outputdir	output directory

Value

list list(resDB, filepath , summary, mcall, dbname)

Examples

print("NO exmple since function also writes the fasta files")

prozor documentation built on Dec. 11, 2021, 9:51 a.m.