cbind.viterbi: Join viterbi results for different chromosomes
In qtl2: Quantitative Trait Locus Mapping in Experimental Crosses
View source: R/cbind_viterbi.R
cbind.viterbi R Documentation
Join viterbi results for different chromosomes
Description
Join multiple viterbi objects, as produced by viterbi(), for the
same set of individuals but different chromosomes.
Usage
## S3 method for class 'viterbi'
cbind(...)
Arguments
...
Imputed genotype objects as produced by
viterbi(). Must have the same set of individuals.
Value
An object of class "viterbi", like the input; see viterbi().
See Also
rbind.viterbi(), viterbi()
Examples
grav2 <- read_cross2(system.file("extdata", "grav2.zip", package="qtl2"))
map <- insert_pseudomarkers(grav2$gmap, step=1)
gA <- viterbi(grav2[1:5,1:2], map, error_prob=0.002)
gB <- viterbi(grav2[1:5,3:4], map, error_prob=0.002)
g <- cbind(gA, gB)
qtl2 documentation built on May 29, 2024, 11:46 a.m.
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View source: R/cbind_viterbi.R
| cbind.viterbi | R Documentation |
Join viterbi results for different chromosomes
Description
Join multiple viterbi objects, as produced by viterbi(), for the
same set of individuals but different chromosomes.
Usage
## S3 method for class 'viterbi'
cbind(...)
Arguments
... |
Imputed genotype objects as produced by
|
Value
An object of class "viterbi", like the input; see viterbi().
See Also
rbind.viterbi(), viterbi()
Examples
grav2 <- read_cross2(system.file("extdata", "grav2.zip", package="qtl2"))
map <- insert_pseudomarkers(grav2$gmap, step=1)
gA <- viterbi(grav2[1:5,1:2], map, error_prob=0.002)
gB <- viterbi(grav2[1:5,3:4], map, error_prob=0.002)
g <- cbind(gA, gB)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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